The detailed information of tRNA gene sequence


Sequence ID>WENV170716460
Genome IDLSQX01000063
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6841
End posion on genome 6925
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tgtttttgtt
tRNA gene sequence 
GGGTACGTGGCGGAATTGGTATACGCGTACGCTTCAGAAGCGTATGCCGCAAGGCTTGGG
AGTTCAAATCTCCCCGTGCCCACCT
Downstream region at tRNA end position 
gaagaagttt
Secondary structure (Cloverleaf model)
>WENV170716460	Leu	CAG
                   t      ACCT gaagaagttt
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     C - G
                     G - C          T A
                    T     C C C T C     A
      T A A        G      | | | | |     A
    T       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      T A T        G     TGCCGCAAGGCTT
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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