The detailed information of tRNA gene sequence


Sequence ID>WENV170716466
Genome IDLSQX01000245
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 190
End posion on genome 114
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttcacaggat
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGTCTAACATGCCGGCCTGTCACGCCGGAGATCGCGGGTTCGAC
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
tattttgctg
Secondary structure (Cloverleaf model)
>WENV170716466	Asp	GTC
                   t      GCCA tattttgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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