The detailed information of tRNA gene sequence


Sequence ID>WENV170716595
Genome IDLSQX01005027
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2398
End posion on genome 2475
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tggccggcgt
tRNA gene sequence 
CGGGCCGTGGCGCAGTCTGGTTAGCGCGTCCGTCTGGGGGGCGGAAGGTCGCGAGTTCGA
ATCTCGCCGGCCCGACCA
Downstream region at tRNA end position 
tcacgaaacg
Secondary structure (Cloverleaf model)
>WENV170716595	Pro	GGG
                   t      ACCA tcacgaaacg
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C T C     A
    C T G A        G      | | | | |     G
  T         C G C G       G C G A G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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