The detailed information of tRNA gene sequence


Sequence ID>WENV170716623
Genome IDLSQX01005923
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4964
End posion on genome 4890
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGTCCCTTCGTCTAGTGGTTAGGACATCAGGTTCTCATCCTGGTAACAGGGGTTCGATTC
CCCTAGGGACTACTA
Downstream region at tRNA end position 
agcaaaaagg
Secondary structure (Cloverleaf model)
>WENV170716623	Glu	CTC
                   t      ACTA agcaaaaagg
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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