The detailed information of tRNA gene sequence


Sequence ID>WENV170716665
Genome IDLSQX01007162
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5573
End posion on genome 5501
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnntcc
tRNA gene sequence 
GCGGCGATAGCTCAGTGGTAGAGCTCTGGTTTTACACACCAGCGGTCGGGGGTTCGAAAC
CCTCTCGCCGCACgt
Downstream region at tRNA end position 
gatttcctgc
Secondary structure (Cloverleaf model)
>WENV170716665	Val	TAC
                   c      ACgt gatttcctgc
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T          A A
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     CGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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