The detailed information of tRNA gene sequence


Sequence ID>WENV170716683
Genome IDLSQX01007843
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 78992
End posion on genome 78906
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
ccgtcgttct
tRNA gene sequence 
GCGGGGGTGGCGGAACGGGTAGACGCGCAAGGCTAAGGACCTTGTGGCCTCTGGGCTGTG
GGAGTTCGAGTCTCCCCCTCCGCACCA
Downstream region at tRNA end position 
tattgggttt
Secondary structure (Cloverleaf model)
>WENV170716683	Leu	AAG
                   t      ACCA tattgggttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C          T G
                    T     C C C T C     A
      C A A        G      | | | | |     G
    G       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGCCTCTGGGCTGT
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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