The detailed information of tRNA gene sequence


Sequence ID>WENV170716725
Genome IDLSQX01009735
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 10575
End posion on genome 10501
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaacaacagt
tRNA gene sequence 
GGGCGACTAGCTCAGCGGGAGAGCGCTTCCCTCACACGGAAGAGGTCGCAGGTTCGAAAC
CTGCGTCGCCCACCA
Downstream region at tRNA end position 
ttttaatttc
Secondary structure (Cloverleaf model)
>WENV170716725	Val	CAC
                   t      ACCA ttttaatttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          A A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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