The detailed information of tRNA gene sequence


Sequence ID>WENV170716790
Genome IDLSQX01011751
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1962
End posion on genome 2033
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aataattttt
tRNA gene sequence 
GGCGCCGTACCCAAGCGGTAAGGGAGAGGTCTGCAAAACCTTTATGCAACGGTTCGAATC
CGTTCGGCGCCTttt
Downstream region at tRNA end position 
tatcaatttt
Secondary structure (Cloverleaf model)
>WENV170716790	Cys	GCA
                   t      Tttt tatcaatttt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T T G C C     A
        G A        A      | | | | |     G
      C     A C C C       A A C G G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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