The detailed information of tRNA gene sequence


Sequence ID>WENV170716974
Genome IDLSQX01018629
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 555
End posion on genome 629
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccagttaat
tRNA gene sequence 
GGCGGCATAGCCAAGTGGCTAAGGCAGAGGACTGCAAATCCTTCATCCTCGGTTCGAGTC
CGAGTGCCGCCTCCA
Downstream region at tRNA end position 
gaaaatggtt
Secondary structure (Cloverleaf model)
>WENV170716974	Cys	GCA
                   t      TCCA gaaaatggtt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    G       A C C G       C T C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     CATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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