The detailed information of tRNA gene sequence


Sequence ID>WENV170716989
Genome IDLSQX01019616
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7008
End posion on genome 7083
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctttgaaaga
tRNA gene sequence 
GGCCCGTTGGAGAAGCGGTCAACTCATAGCCCTCTCAAGGCTACATGCACGGGTTCGAAT
CCCGTACGGGTCACCA
Downstream region at tRNA end position 
gtggattatg
Secondary structure (Cloverleaf model)
>WENV170716989	Glu	CTC
                   a      ACCA gtggattatg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      C A          A     CATGC
                    T - A
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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