The detailed information of tRNA gene sequence


Sequence ID>WENV170717022
Genome IDLSQX01020667
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2155
End posion on genome 2080
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cacttagcca
tRNA gene sequence 
GGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATTGCTCCCACCA
Downstream region at tRNA end position 
aggagccgga
Secondary structure (Cloverleaf model)
>WENV170717022	Val	TAC
                   a      ACCA aggagccgga
                     G - C
                     G - C
                     G - C
                     C   T
                     G - C
                     C - G
                     A - T          C G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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