The detailed information of tRNA gene sequence


Sequence ID>WENV170717053
Genome IDLSQX01022679
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4058
End posion on genome 3983
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caaaattaat
tRNA gene sequence 
CGGGGTGTAGCGCAGCTGGTAGCGCACGTGGTTTGGGACCATGGGGCCGGGGGTTCAAGT
CCTCTCACCCCGACCA
Downstream region at tRNA end position 
aaactgatac
Secondary structure (Cloverleaf model)
>WENV170717053	Pro	TGG
                   t      ACCA aaactgatac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      C G A        A      + | + | |     A
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGCC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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