The detailed information of tRNA gene sequence


Sequence ID>WENV170717079
Genome IDLSQX01023800
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2063
End posion on genome 1971
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcccaaactT
tRNA gene sequence 
GGAGGGATGGCAGAGTCCGGTTGAATGCGCATGACTCGAAATCATGTGTGCTCGTAAGAG
CACCGGGGGTTCAAATCCCTCTCCCTCCGCCC
Downstream region at tRNA end position 
gtccgcgcct
Secondary structure (Cloverleaf model)
>WENV170717079	Ser	CGA
                   T      GCCC gtccgcgcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     A
  C         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        G     TGTGCTCGTAAGAGCACC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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