The detailed information of tRNA gene sequence


Sequence ID>WENV170717081
Genome IDLSQX01023823
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1707
End posion on genome 1634
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcaaacacgt
tRNA gene sequence 
GGGCCCGTGGGGTAGCTTGGTATCCTTGTGGCTTCGGGAGTCACTGACTCCGGTTCAAAT
CCGGGCGGGCCCACtc
Downstream region at tRNA end position 
attatcattg
Secondary structure (Cloverleaf model)
>WENV170717081	Pro	CGG
                   t      ACtc attatcattg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      + | | | |     A
    T       T G G G       T C C G G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    G - C
                    T - A
                    G - C
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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