The detailed information of tRNA gene sequence


Sequence ID>WENV170717098
Genome IDLSQX01024469
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 14779
End posion on genome 14871
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtaatgacg
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCGGTCGACTCGAAATCGACTAGGCGGTGATGAGCC
GTCTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttaagaaat
Secondary structure (Cloverleaf model)
>WENV170717098	Ser	CGA
                   g      GCCA tttaagaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGTGATGAGCCGTCTC
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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