The detailed information of tRNA gene sequence


Sequence ID>WENV170717102
Genome IDLSQX01024543
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1168
End posion on genome 1094
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggccgcatgc
tRNA gene sequence 
AGTCCCATAGCTCAGTGGAAGAGCGTTCCGTTCACACCGGAAAGGTCGCTGGTTCGAACC
CAGTTGGGACTACCA
Downstream region at tRNA end position 
ccgcccgccg
Secondary structure (Cloverleaf model)
>WENV170717102	Val	CAC
                   c      ACCA ccgcccgccg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     T G A C C     A
        G A        A      + | | | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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