The detailed information of tRNA gene sequence


Sequence ID>WENV170717150
Genome IDLSQX01025737
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 258
End posion on genome 182
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taggattctt
tRNA gene sequence 
GGACCCTTAGCTCAGTTGGTTAGAGCTACCGGCTCATAACCGGTTGGTCGTAGGTTCGAG
TCCTACAGGGTCCACCA
Downstream region at tRNA end position 
aaaatggagg
Secondary structure (Cloverleaf model)
>WENV170717150	Met	CAT
                   t      ACCA aaaatggagg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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