The detailed information of tRNA gene sequence


Sequence ID>WENV170717212
Genome IDLSQX01027990
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 402
End posion on genome 492
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catattctaT
tRNA gene sequence 
GCTGAGGTAGTCTAGACCGGTAAGGCGCGGGCCTGGAAAGCCCGTGGGGCGTTGAGCCCC
TCGGGAGTTCAAATCTCCCCCTCAGCGTCC
Downstream region at tRNA end position 
ctatttctgt
Secondary structure (Cloverleaf model)
>WENV170717212	Ser	GGA
                   T      GTCC ctatttctgt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGGGCGTTGAGCCCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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