The detailed information of tRNA gene sequence


Sequence ID>WENV170717231
Genome IDLSQX01028636
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6498
End posion on genome 6424
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgaaaacag
tRNA gene sequence 
CGGGATGTAGCACAGTTGGCTAGCGCGCCACGTTCGGGACGTGGAGGTCGGAAGTTCGAG
TCTTCTCATCCCGACtc
Downstream region at tRNA end position 
aaccttcaat
Secondary structure (Cloverleaf model)
>WENV170717231	Pro	CGG
                   g      ACtc aaccttcaat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C T T C     A
      T G A        A      + | | | |     G
    T       C A C G       G G A A G     C
    G       |   | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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