The detailed information of tRNA gene sequence


Sequence ID>WENV170717277
Genome IDLSQX01029951
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1117
End posion on genome 1192
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tagacaattg
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGGGAGCACCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATAGTGCCCACCA
Downstream region at tRNA end position 
agaatttttt
Secondary structure (Cloverleaf model)
>WENV170717277	Val	TAC
                   g      ACCA agaatttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          C G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G G          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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