The detailed information of tRNA gene sequence


Sequence ID>WENV170717330
Genome IDLSQX01032046
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 173
End posion on genome 97
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaacgacga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGCCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
cgaaaaataa
Secondary structure (Cloverleaf model)
>WENV170717330	Met	CAT
                   a      ACCA cgaaaaataa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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