The detailed information of tRNA gene sequence


Sequence ID>WENV170717347
Genome IDLSQX01032588
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 171
End posion on genome 257
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
ccgtcgttgc
tRNA gene sequence 
GCGGGGGTGGCGGAACAGGTAGACGCGCAAGGCTAAGGACCTTGTGGCTGCAAGGCTGTG
GGAGTTCGAGTCTCCCCCTCCGCACCA
Downstream region at tRNA end position 
tgactacaaa
Secondary structure (Cloverleaf model)
>WENV170717347	Leu	AAG
                   c      ACCA tgactacaaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C          T G
                    T     C C C T C     A
      C A A        G      | | | | |     G
    A       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGCTGCAAGGCTGT
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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