The detailed information of tRNA gene sequence


Sequence ID>WENV170717390
Genome IDLSQX01034008
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6084
End posion on genome 6010
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctctgtcgt
tRNA gene sequence 
GGGTGACTAGCTCAGTGGAAGAGCGCTTCCTTCACACGGAAGAGGTCACAGGTTCGAACC
CTGTGTCGCCCACCA
Downstream region at tRNA end position 
tttgatgaac
Secondary structure (Cloverleaf model)
>WENV170717390	Val	CAC
                   t      ACCA tttgatgaac
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T
                     C - G          C A
                    T     T G T C C     A
        G A        A      | | | | |     G
      T     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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