The detailed information of tRNA gene sequence


Sequence ID>WENV170717459
Genome IDLSQX01035918
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 336
End posion on genome 412
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCCCTGGTTCGAT
TCCAGGCACGCCCACCA
Downstream region at tRNA end position 
attggctgcg
Secondary structure (Cloverleaf model)
>WENV170717459	Ile	GAT
                   n      ACCA attggctgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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