The detailed information of tRNA gene sequence


Sequence ID>WENV170717467
Genome IDLSQX01036117
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2239
End posion on genome 2316
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccggtcagca
tRNA gene sequence 
CGGGACGTAGCGCAGTCTGGTTAGCGTACCTGCATGGGGTGCAGGTGGTCGGAGGTTCGA
ATCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
gaaatgatat
Secondary structure (Cloverleaf model)
>WENV170717467	Pro	GGG
                   a      ACCA gaaatgatat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | +                 T T
  G         G C G T
    T T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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