The detailed information of tRNA gene sequence


Sequence ID>WENV170717503
Genome IDLSQX01037870
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 74
End posion on genome 2
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtatgaggga
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGCATCCTAGGAGACTGGGGGTCTTCTGACCTGCGTTCGAAT
CGCAGTGGCCCCAtnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170717503	Pro	TGG
                   a      Atnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G A C G C     A
      C G A        A      | | | | |     G
    C       T G G G       C T G C G     C
    T       | + | |                 T T
    G       A T C C
      G C          T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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