The detailed information of tRNA gene sequence


Sequence ID>WENV170717534
Genome IDLSQX01039407
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1172
End posion on genome 1096
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
acttccccac
tRNA gene sequence 
GGACGGGTAGCTCAGCTGGATAGAGTGTTGGCCTCCGAAGCCAAAGGTCGCGGGTTCGAA
TCCCGCCTCGTTCACCA
Downstream region at tRNA end position 
gtaaaaacag
Secondary structure (Cloverleaf model)
>WENV170717534	Arg	CCG
                   c      ACCA gtaaaaacag
                     G - C
                     G + T
                     A - T
                     C - G
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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