The detailed information of tRNA gene sequence


Sequence ID>WENV170717565
Genome IDLSQX01040773
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 15813
End posion on genome 15885
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agttttattt
tRNA gene sequence 
GCCCTTGTAGCTCAGCCGGCAGAGCACCACCATGGTAAGGTGGGGGTCATCGGTTCGAAT
CCGATCGAGGGCTtaa
Downstream region at tRNA end position 
tttttgttta
Secondary structure (Cloverleaf model)
>WENV170717565	Thr	GGT
                   t      Ttaa tttttgttta
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      | | | | |     G
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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