The detailed information of tRNA gene sequence


Sequence ID>WENV170717569
Genome IDLSQX01040804
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1506
End posion on genome 1434
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taaggcagtt
tRNA gene sequence 
GCCGCTGTGGCTTAGTGGTATAGCGGCTGATTCGTAATCAGCAGGCCGGGGGTTCGAATC
CCTCCAGCGGCTCtt
Downstream region at tRNA end position 
cttcattttc
Secondary structure (Cloverleaf model)
>WENV170717569	Thr	CGT
                   t      TCtt cttcattttc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
        G A        G      | + | | |     G
      T     T T C G       G G G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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