The detailed information of tRNA gene sequence


Sequence ID>WENV170717570
Genome IDLSQX01040856
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3013
End posion on genome 2938
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gggcggcaat
tRNA gene sequence 
GCGCCTGTAGCTCAGCGGATAGAGTATCGGCCTCCGGAGCCGAGGGTCTGGCGTTCGAAT
CGCCACAGGCGCGCCA
Downstream region at tRNA end position 
tagtaaactg
Secondary structure (Cloverleaf model)
>WENV170717570	Arg	CCG
                   t      GCCA tagtaaactg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A C C G C     A
      C G A        A      | | | | |     G
    G       C T C G       T G G C G     C
    G       | | | +                 T T
    A       G A G T
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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