The detailed information of tRNA gene sequence


Sequence ID>WENV170717581
Genome IDLSQX01041495
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 54191
End posion on genome 54264
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atggttggta
tRNA gene sequence 
CGGGGTGTAGTTCAGATGGCTAGAACGCTTGCATGGGGTGCAAGAGGCCGCTCGTTCAAG
TCGAGTCACCCCGAttt
Downstream region at tRNA end position 
tctaatcagg
Secondary structure (Cloverleaf model)
>WENV170717581	Pro	GGG
                   a      Attt tctaatcagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G A G C     A
      A G A        A      + | | | |     A
    T       C T T G       G C T C G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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