The detailed information of tRNA gene sequence


Sequence ID>WENV170717593
Genome IDLSQX01041692
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1904
End posion on genome 1829
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttcgtgtt
tRNA gene sequence 
CGGGGTATAGCTTATTTGGTAGAGCGCCTGCCTTGAAAGCAGGAGGCCAGCGGTTCGAAT
CCGCTTCCCTCCACCA
Downstream region at tRNA end position 
gctacgtacc
Secondary structure (Cloverleaf model)
>WENV170717593	Ser	TGA
                   t      ACCA gctacgtacc
                     C   C
                     G - C
                     G + T
                     G - C
                     G - C
                     T   C
                     A - T          T A
                    T     T C G C C     A
      T T A        A      | | | | |     G
    T       T T C G       A G C G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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