The detailed information of tRNA gene sequence


Sequence ID>WENV170717628
Genome IDLSQX01043407
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1356
End posion on genome 1441
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatcgcctg
tRNA gene sequence 
GGAGGGTTGTCCGAGCGGCCGAAGGATCTGGTCTTGAAAACCAGTGGGCAGCAATGTCCC
GTGGGTTCGAATCCCACGCCCTCCGCat
Downstream region at tRNA end position 
catcctgaga
Secondary structure (Cloverleaf model)
>WENV170717628	Ser	TGA
                   g      GCat catcctgaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        T     TGGGCAGCAATGTCCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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