The detailed information of tRNA gene sequence


Sequence ID>WENV170717683
Genome IDLSQX01045764
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7791
End posion on genome 7717
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgtggctttc
tRNA gene sequence 
GGGCGACTAGCTCAGCGGAAGAGCGCTTCCCTCACACGGAAGAGGTCACAGGTTCGAACC
CTGTGTCGCCCACCA
Downstream region at tRNA end position 
ctggatattt
Secondary structure (Cloverleaf model)
>WENV170717683	Val	CAC
                   c      ACCA ctggatattt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          C A
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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