The detailed information of tRNA gene sequence


Sequence ID>WENV170717714
Genome IDLSQX01046903
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2977
End posion on genome 2901
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgcttaccc
tRNA gene sequence 
GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
TCCCGTCCATACCGCAA
Downstream region at tRNA end position 
aaagcgactt
Secondary structure (Cloverleaf model)
>WENV170717714	Asp	GTC
                   c      GCAA aaagcgactt
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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