The detailed information of tRNA gene sequence


Sequence ID>WENV170717722
Genome IDLSQX01047260
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9305
End posion on genome 9379
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gccacaggct
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGCGGTTCGATTC
CGCTATGGGCTACAA
Downstream region at tRNA end position 
aacacttaag
Secondary structure (Cloverleaf model)
>WENV170717722	Glu	TTC
                   t      ACAA aacacttaag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C G C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G C G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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