The detailed information of tRNA gene sequence


Sequence ID>WENV170717729
Genome IDLSQX01047440
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 819
End posion on genome 743
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggtgtttcg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
gaacccactc
Secondary structure (Cloverleaf model)
>WENV170717729	Met	CAT
                   g      ACCA gaacccactc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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