The detailed information of tRNA gene sequence


Sequence ID>WENV170717775
Genome IDLSQX01049425
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2425
End posion on genome 2340
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttccggaaaa
tRNA gene sequence 
GCGGGAGTAACCAAGCGGTCAACGGTGGCAGACTCAAGATCTGTTCGCGTAGGCGTTCAG
GGGTTCGAATCCCTTCTCCCGCACTA
Downstream region at tRNA end position 
acttttttag
Secondary structure (Cloverleaf model)
>WENV170717775	Leu	CAA
                   a      ACTA acttttttag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    G       A C C A       A G G G G     C
    G         | | |                 T T
    T       C G G T
      C A A        G     TCGCGTAGGCGTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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