The detailed information of tRNA gene sequence


Sequence ID>WENV170717776
Genome IDLSQX01049467
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1892
End posion on genome 1816
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatacacgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAA
TCCTGCCTCCGCAACCA
Downstream region at tRNA end position 
aagaaaaacc
Secondary structure (Cloverleaf model)
>WENV170717776	Met	CAT
                   t      ACCA aagaaaaacc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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