The detailed information of tRNA gene sequence


Sequence ID>WENV170717798
Genome IDLSQX01050003
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 49251
End posion on genome 49159
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttttcttt
tRNA gene sequence 
GGAGATGTGGCCGAGAGGTTGAAGGTACTCCCCTGCTAAGGGAGCATGCGGCTTATACCC
GCATCGAGGGTTCGAATCCCTCCATCTCCGCCA
Downstream region at tRNA end position 
aagatactga
Secondary structure (Cloverleaf model)
>WENV170717798	Ser	GCT
                   t      GCCA aagatactga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | +                 T T
    T       A G G T
      T G A        A     CATGCGGCTTATACCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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