The detailed information of tRNA gene sequence


Sequence ID>WENV170717861
Genome IDLSQX01052503
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 449
End posion on genome 525
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
caccacatgg
tRNA gene sequence 
GGGCTCATAGCTCAGCCGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
aagctttttc
Secondary structure (Cloverleaf model)
>WENV170717861	Ile	GAT
                   g      ACCA aagctttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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