The detailed information of tRNA gene sequence


Sequence ID>WENV170717878
Genome IDLSQX01053010
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3348
End posion on genome 3274
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gcacacgcag
tRNA gene sequence 
GGGAATGTCGTATAGTGGCTAATACCTCAGCCTTCCAAGCTGAAGACGCGGGTTCGATTC
CCGTCATTCCCTCCA
Downstream region at tRNA end position 
cttttcgctc
Secondary structure (Cloverleaf model)
>WENV170717878	Gly	TCC
                   g      TCCA cttttcgctc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
      T G A        C      + | | | |     G
    G       T A T G       G C G G G     C
    G       | | | |                 T T
    C       A T A C
      T A          C     AGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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