The detailed information of tRNA gene sequence


Sequence ID>WENV170717978
Genome IDLSQX01056949
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6970
End posion on genome 7046
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tggcttatta
tRNA gene sequence 
GGCCCGGTAGTTCAGCTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
ttgtattaaa
Secondary structure (Cloverleaf model)
>WENV170717978	Asp	GTC
                   a      GCCA ttgtattaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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