The detailed information of tRNA gene sequence


Sequence ID>WENV170717991
Genome IDLSQX01057578
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 28579
End posion on genome 28669
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggccagtcaa
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCGAAGGTGATCGCCTCGAAAGCGATTGTTGGGTAACCCCCA
ACCGAGGGTTCAAATCCCTCCGCCACCGCCA
Downstream region at tRNA end position 
tgtgatgccg
Secondary structure (Cloverleaf model)
>WENV170717991	Ser	CGA
                   a      GCCA tgtgatgccg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTTGGGTAACCCCCAACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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