The detailed information of tRNA gene sequence


Sequence ID>WENV170718072
Genome IDLSQX01060188
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2020
End posion on genome 2108
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacattccgT
tRNA gene sequence 
GCTGAGGTAGTCTAGACCGGTAGGGCGCGGGCCTGGAAAGCCCGTGGGGCGTTGAGCCCC
TCGGGAGTTCAAATCTCCCCCTCAGCGTtt
Downstream region at tRNA end position 
taacatacga
Secondary structure (Cloverleaf model)
>WENV170718072	Ser	GGA
                   T      GTtt taacatacga
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       + | + |                 T T
    G       G G G C
      G T A        G     TGGGGCGTTGAGCCCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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