The detailed information of tRNA gene sequence


Sequence ID>WENV170718090
Genome IDLSQX01061080
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 15459
End posion on genome 15384
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgtctagtag
tRNA gene sequence 
GCCCATGTAGCTCAGTAGGCAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCGGTTCGATC
CCGGTCATGGGCTCCA
Downstream region at tRNA end position 
tttttttagg
Secondary structure (Cloverleaf model)
>WENV170718090	Thr	GGT
                   g      TCCA tttttttagg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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