The detailed information of tRNA gene sequence


Sequence ID>WENV170718099
Genome IDLSQX01061553
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 147
End posion on genome 60
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccattgaaag
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTGAAGGCAACGGTCTTGAAAACCGTCGATGGGCGACTATCC
GTGAGTTCGAATCTCACCTCCTCCGCCA
Downstream region at tRNA end position 
aatttaaaaa
Secondary structure (Cloverleaf model)
>WENV170718099	Ser	TGA
                   g      GCCA aatttaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGATGGGCGACTATCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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