The detailed information of tRNA gene sequence


Sequence ID>WENV170718113
Genome IDLSQX01062382
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 842
End posion on genome 766
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aagtatccac
tRNA gene sequence 
GGGCCTGTGGTCTAGCTGGTTATGACGTCGCCCTTACACGGCGAAGATCTCCGGTTCGAA
TCCGGACAGGCCCATCA
Downstream region at tRNA end position 
atttttcgca
Secondary structure (Cloverleaf model)
>WENV170718113	Val	TAC
                   c      ATCA atttttcgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A G G C C     A
      C G A        G      | | | | |     G
    T       T C T G       T C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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