The detailed information of tRNA gene sequence


Sequence ID>WENV170718186
Genome IDLSQX01065399
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3997
End posion on genome 3920
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaaataaacc
tRNA gene sequence 
GGGCGTTTAGCTCAGCTGGTTCAGAGCACCTGCCTTACAAGCAGGGGGTCGGCGGTTCAA
ATCCGTCAACGCCCACCA
Downstream region at tRNA end position 
tcaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170718186	Val	TAC
                   c      ACCA tcaaaatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T A
                    T     C T G C C     A
    T C G A        A      | + | | |     A
  G         C T C G       G G C G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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