The detailed information of tRNA gene sequence


Sequence ID>WENV170718199
Genome IDLSQX01065771
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 37742
End posion on genome 37666
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaaaagt
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGACGGTTCGAG
TCCGTTCCGGGTCGCCA
Downstream region at tRNA end position 
ttttttgcct
Secondary structure (Cloverleaf model)
>WENV170718199	Asp	GTC
                   t      GCCA ttttttgcct
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A C G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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